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PETROGRAPHIC ANALYSIS USING SOFTWARE CONTROL AND THE STAGELEDGE DEVICE
In order to support the
systematic quantitative microscopy analysis through the PETROLEDGE system,
we have developed an electromechanical microscope stage, called STAGELEDGE,
which is controlled by the software. The systematic quantitative petrographic
analysis requires a uniform scanning of the thin sections, using a grid of
steps defined according the rocks textures and fabrics. This approach not only
guarantees that the thin sections can be representatively explored, but most
important, that the spatial coordinates of each quantified point can be
recorded in a virtual map.
Our approach is based on
the creation of a digital map of the points quantified and described on the
thin section, in which virtual features can be created. Although such map does
not eliminate the need for the real thin section, it has some significant
advantages over the traditional approach that uses the original section both
for description and for later verifications. This “virtual thin section” is
keyed to the recorded petrographic description referenced through a defined
ontology. The “virtual thin section” constituted by the digital map and the
description can be sent over the Internet to several petrographers, who can
independently evaluate the interpretations previously derived from the
description. This involves neither costs for shipping the real thin sections,
or risks associated with a possible loss of the physical thin sections. Moreover,
the virtual thin sections show potential for unlimited documentation via
hyperlinks to images, video, audio, and text provided by expert petrographers,
as well as to other resources available on the Internet and related to the
contents of the sections. This sets a new level of rich documentation, turning
the virtual thin sections into ideal training tools. This situation is
illustrated in Fig. 1, which shows
an image corresponding to a portion of a sandstone thin section containing
links to different media formats: audio, video, other images, websites, and
other observations. These resources allow complementing the information conventionally
captured by the petrographers during the quantification. The images should have
less than two megabytes, in order not to slow down the system performance.

Fig. 1. A sandstone thin-section image with links and
observations: A: Video file C:video.mov; B: WEB link; C: Sound file
C:quartzExplain.mp3; Observations: Grains of quartz (q) covered by coatings of
iron oxide (arrows); zoned and partially dissolved crystals of dolomite (d);
microcrystalline kaolinite (k) partially filling the intergranular pores
(impregnated by blue epoxy resin); uncrossed polarizers.
The PETROLEDGE system
controls the steps of the STAGELEDGE, allows the user to select
constituents and features described in the domain ontology and associates them
to the current position under analysis in the thin section. Fig. 2 illustrates
a PETROLEDGE interface showing the constituents of a given rock sample
and a partial menu providing specific ontology terms. The quantitative
petrographic analysis identifies and saves the location of every constituent
positioned in each of the coordinates in the virtual net, controlled by STAGELEDGE.
The PETROLEDGE interface depicts different minerals using colors, as
presented in Fig. 3. Thus, with just a quick glance, the geologist can have a
good idea of the spatial distribution of the constituents and pores identified
in the thin section.

Fig. 2. Rock sample composition interface with the
description ontology for constituents.
In the process of creating
the digital map, the thin sections are digitized with a regular flatbed
scanner. Since flatbed scanners can capture images at different resolutions, it
is necessary to specify the selected resolution in points per inch (ppi), thus
relating pixels to real distances in the thin section. According to our
experience, the use of 600 ppi provides satisfactory results. The resulting
images are used as a base to place the additional documental information. This
stage requires the careful correction of the scale, tilt and coordinates of
origin of the scanned image, in order to provide a correct association with the
origin and scale provided by STAGELEDGE. Once the image has been captured and
referenced to the actual position in the equipment, the documentation can be
referenced to the real spatial coordinates.
The digital map of the rock
uses the digital thin section image as a base map on top of which the additional
documental information will be placed. At the end of the process, an extensive
documentation of the thin section is provided. For example, it is possible to
locate where the 10th detrital quartz is located and then visualizing it.
Moreover, the system guarantees that all descriptions would be performed based
on a formal and complete petrographic vocabulary, defined in the domain
ontology. This feature will provide extra capabilities by allowing the
automatic geological interpretation and correlation with the captured
information.

Fig. 3. Thin section with points of different
constituents, identified by different colors.
The constituents and pores
that can be found in a thin section are fully described in a domain ontology,
as well as the attributes and domain of values of them. The ontology also
describes in which way the instances of qualified constituents can indicate the
rock-formation environment. This is expressed by knowledge graphs, a
one-level tree where the root node represents the interpretation hypothesis and
the leaf nodes represent visual chunks identified by the experts in the image
of rock as pieces of evidence necessary to support the interpretation.

Fig. 4. Exemple of diagenetic environment interpretation Graph.
The uncertainty of
interpretation is represented in the knowledge-graph by a threshold value that
represents the minimum amount of evidence needed to indicate it. Also, the
chunks have an influence factor and are combined to increase the influence and
the certainty of the interpretation stated. By their side, the chunks
represents in an AND-OR tree the several ways in which way an evidence can be
recognized in the rock, such as, possible minerals, possible habits, locations,
etc. For each significant feature identified in the thin section, the user can
capture a photograph and associate it to the coordinates of the described point
or annotate the captured image itself, describing the special characteristics
that must be considered. Thus, the quantitative analytical process generates a
map containing the documentation of the most important diagnostic features for
reservoir evaluation. According to the user interest, the system can
selectively show the location of the special features, as exemplified in the
left window of Fig. 5, where the segments indicate the trajectory of the
analysis and the white dots shows the position of the selected constituent. As
the user moves the mouse over a point for which a picture has been taken, it is
automatically shown in right side window (Fig. 5). This documentation will
provide further validation to the reasoning process or may reveal possible
errors in feature identification.

Fig. 5. Interface showing the virtual thin section with
a superimposed map of the analytical pathways and points (left). As the mouse
cursor passes over a feature point (white dot) for which a picture has been
taken, the photograph is shown on the right. Note that the photograph itself
contains a series of annotations in the form of hyperlinks.
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